Good. Because *that's where the people are*.
Those two states have a population of 47 million. That's more than the combined populations of Wyoming, Alaska, South Dakota, North Dakota, Delaware, Montana, Rhode Island, Maine, New Hampshire, Hawaii, Idaho, West Virginia, Nebraska, New Mexico, Kansas, Nevada, Arkansas, Mississippi, Utah, Iowa, Oklahoma and Connecticutt.
The electoral college was one of multiple compromise mechanisms put in to protect slave states. If you really want to argue that different regions of the country are sufficiently different so as to need special protection, whatever, but the way that the current state system is set up severely overdoes it. And that's even before we get into the absurdity of the U.S. Senate allocations.
But hell, your statement isn't even true. The winner of the popular vote did not win New York or California in 2004, 1988, 1976.